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BGFE: A Deep Learning Model for ncRNA-Protein Interaction Predictions Based on Improved Sequence Information 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 卷号: 20, 期号: 4, 页码: 1-14
Authors:  Zhan, ZH (Zhan, Zhao-Hui)[ 1 ];  Jia, LN (Jia, Li-Na)[ 2 ];  Zhou, Y (Zhou, Yong)[ 1 ];  Li, LP (Li, Li-Ping)[ 3 ];  Yi, HC (Yi, Hai-Cheng)[ 3 ]
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ncRNA-protein interaction  bi-gram  position specific scoring matrix  k-mers  deep learning  
Sequence-based Prediction of Protein-Protein Interactions Using Gray Wolf Optimizer-Based Relevance Vector Machine 期刊论文
EVOLUTIONARY BIOINFORMATICS, 2019, 卷号: 15, 期号: 5, 页码: 1-10
Authors:  An, JY (An, Ji-Yong)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 3 ];  Zhou, Y (Zhou, Yong)[ 1,2 ];  Wang, DF (Wang, Da-Fu)[ 1,2 ]
Adobe PDF(462Kb)  |  Favorite  |  View/Download:29/0  |  Submit date:2019/06/28
RVM  gray wolf optimizer  BIG  PSSM  
应用于短时语音语种识别的时长扩展方法 期刊论文
清华大学学报(自然科学版), 2018, 卷号: 58, 期号: 3, 页码: 254-259
Authors:  苗晓晓;  张健;  索宏彬;  周若华;  颜永红
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语种识别  短时  时域伸缩  语速  
Accurate Prediction of ncRNA-Protein Interactions From the Integration of Sequence and Evolutionary Information 期刊论文
FRONTIERS IN GENETICS, 2018, 卷号: 9, 期号: 10, 页码: 1-9
Authors:  Zhan, ZH (Zhan, Zhao-Hui)[ 1 ];  You, ZH (You, Zhu-Hong)[ 2 ];  Li, LP (Li, Li-Ping)[ 2 ];  Zhou, Y (Zhou, Yong)[ 1 ];  Yi, HC (Yi, Hai-Cheng)[ 2 ]
Adobe PDF(1220Kb)  |  Favorite  |  View/Download:23/0  |  Submit date:2018/10/19
Ncrna-protein Interactions  Pssm  Lightgbm  Pseudo-zernike Moments  K-mers  
An improved efficient rotation forest algorithm to predict the interactions among proteins 期刊论文
SOFT COMPUTING, 2018, 卷号: 22, 期号: 10, 页码: 3373-3381
Authors:  Wang, L (Wang, Lei);  You, ZH (You, Zhu-Hong);  Xia, SX (Xia, Shi-Xiong);  Chen, X (Chen, Xing);  Yan, X (Yan, Xin);  Zhou, Y (Zhou, Yong);  Liu, F (Liu, Feng)
Adobe PDF(764Kb)  |  Favorite  |  View/Download:21/0  |  Submit date:2018/06/20
Rotation Forest  Ensemble Learning  Bioinformatics  Support Vector Machine  
Using Two-dimensional Principal Component Analysis and Rotation Forest for Prediction of Protein-Protein Interactions 期刊论文
SCIENTIFIC REPORTS, 2018, 卷号: 8, 期号: 12874, 页码: 1-9
Authors:  Wang, L (Wang, Lei)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 2 ];  Yan, X (Yan, Xin)[ 4 ];  Xia, SX (Xia, Shi-Xiong)[ 3 ];  Liu, F (Liu, Feng)[ 5 ];  Li, LP (Li, Li-Ping)[ 2 ];  Zhang, W (Zhang, Wei)[ 1 ];  Zhou, Y (Zhou, Yong)[ 3 ]
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A Computational-Based Method for Predicting Drug-Target Interactions by Using Stacked Autoencoder Deep Neural Network 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2018, 卷号: 25, 期号: 3, 页码: 361-373
Authors:  Wang, L (Wang, Lei);  You, ZH (You, Zhu-Hong);  Chen, X (Chen, Xing);  Xia, SX (Xia, Shi-Xiong);  Liu, F (Liu, Feng);  Yan, X (Yan, Xin);  Zhou, Y (Zhou, Yong);  Song, KJ (Song, Ke-Jian)
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Deep Learning  Drug-target Interactions  Position-specific Scoring Matrix  Stacked Autoencoder  
Prediction of Drug-Target Interaction Networks from the Integration of Protein Sequences and Drug Chemical Structures 期刊论文
MOLECULES, 2017, 卷号: 22, 期号: 7, 页码: 1-13
Authors:  Meng, FR (Meng, Fan-Rong);  You, ZH (You, Zhu-Hong);  Chen, X (Chen, Xing);  Zhou, Y (Zhou, Yong);  An, JY (An, Ji-Yong)
Adobe PDF(797Kb)  |  Favorite  |  View/Download:34/0  |  Submit date:2017/12/14
Dti  Rvm  Bigp  Pca  
Advancing the prediction accuracy of protein-protein interactions by utilizing evolutionary information from position-specific scoring matrix and ensemble classifier 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2017, 卷号: 418, 期号: 4, 页码: 105-110
Authors:  Wang, L (Wang, Lei);  You, ZH (You, Zhu-Hong);  Xia, SX (Xia, Shi-Xiong);  Liu, F (Liu, Feng);  Chen, X (Chen, Xing);  Yan, X (Yan, Xin);  Zhou, Y (Zhou, Yong)
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Position-specific Scoring Matrix  Multiple Sequences Alignments  Rotation Forest  Cancer  
NRDTD: a database for clinically or experimentally supported non-coding RNAs and drug targets associations 期刊论文
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION, 2017, 卷号: 1, 期号: 7, 页码: 1-6
Authors:  Chen, X (Chen, Xing);  Sun, YZ (Sun, Ya-Zhou);  Zhang, DH (Zhang, De-Hong);  Li, JQ (Li, Jian-Qiang);  Yan, GY (Yan, Gui-Ying);  An, JY (An, Ji-Yong);  You, ZH (You, Zhu-Hong)
Adobe PDF(605Kb)  |  Favorite  |  View/Download:23/0  |  Submit date:2017/12/11