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An Improved Deep Forest Model for Predicting Self-Interacting Proteins From Protein Sequence Using Wavelet Transformation 期刊论文
FRONTIERS IN GENETICS, 2019, 卷号: 10, 期号: 3, 页码: 1-10
Authors:  Chen, ZH (Chen, Zhan-Heng)[ 1,2 ];  Li, LP (Li, Li-Ping)[ 1 ];  He, Z (He, Zhou)[ 3 ];  Zhou, JR (Zhou, Ji-Ren)[ 1 ];  Li, YM (Li, Yangming)[ 4 ];  Wong, L (Wong, Leon)[ 1,2 ]
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self-interacting proteins  disease  position-specific scoring matrix  deep learning  wavelet transform  
BGFE: A Deep Learning Model for ncRNA-Protein Interaction Predictions Based on Improved Sequence Information 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 卷号: 20, 期号: 4, 页码: 1-14
Authors:  Zhan, ZH (Zhan, Zhao-Hui)[ 1 ];  Jia, LN (Jia, Li-Na)[ 2 ];  Zhou, Y (Zhou, Yong)[ 1 ];  Li, LP (Li, Li-Ping)[ 3 ];  Yi, HC (Yi, Hai-Cheng)[ 3 ]
Adobe PDF(1535Kb)  |  Favorite  |  View/Download:10/0  |  Submit date:2019/05/16
ncRNA-protein interaction  bi-gram  position specific scoring matrix  k-mers  deep learning  
LMTRDA: Using logistic model tree to predict MiRNA-disease associations by fusing multi-source information of sequences and similarities 期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2019, 卷号: 15, 期号: 3, 页码: 1-18
Authors:  Wang, L (Wang, Lei)[ 1 ];  You, ZH (You, Zhu-Hong)[ 1 ];  Chen, X (Chen, Xing)[ 2 ];  Li, YM (Li, Yang-Ming)[ 3 ];  Dong, YN (Dong, Ya-Nan)[ 4 ];  Li, LP (Li, Li-Ping)[ 1 ];  Zheng, K (Zheng, Kai)[ 1 ]
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Prediction of Self-Interacting Proteins from Protein Sequence Information Based on Random Projection Model and Fast Fourier Transform 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 卷号: 20, 期号: 4, 页码: 1-15
Authors:  Chen, ZH (Chen, Zhan-Heng)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 1,2 ];  Li, LP (Li, Li-Ping)[ 1 ];  Wang, YB (Wang, Yan-Bin)[ 1 ];  Wong, L (Wong, Leon)[ 1,2 ];  Yi, HC (Yi, Hai-Cheng)[ 1,2 ]
Adobe PDF(969Kb)  |  Favorite  |  View/Download:12/0  |  Submit date:2019/05/16
self-interacting proteins  position-specific scoring matrix  fast Fourier transform  random projection  
药用资源沙枣产胶影响因素分析 期刊论文
新疆农业科学, 2018, 卷号: 55, 期号: 4, 页码: 697-702
Authors:  王果平;  努尔买买提·阿布都克里木;  阿吉艾克拜尔·艾莎
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沙枣胶  多糖  环境  种源  
Accurate Prediction of ncRNA-Protein Interactions From the Integration of Sequence and Evolutionary Information 期刊论文
FRONTIERS IN GENETICS, 2018, 卷号: 9, 期号: 10, 页码: 1-9
Authors:  Zhan, ZH (Zhan, Zhao-Hui)[ 1 ];  You, ZH (You, Zhu-Hong)[ 2 ];  Li, LP (Li, Li-Ping)[ 2 ];  Zhou, Y (Zhou, Yong)[ 1 ];  Yi, HC (Yi, Hai-Cheng)[ 2 ]
Adobe PDF(1220Kb)  |  Favorite  |  View/Download:19/0  |  Submit date:2018/10/19
Ncrna-protein Interactions  Pssm  Lightgbm  Pseudo-zernike Moments  K-mers  
Improving Prediction of Self-interacting Proteins Using Stacked Sparse Auto-Encoder with PSSM profiles 期刊论文
INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES, 2018, 卷号: 14, 期号: 8, 页码: 983-991
Authors:  Wang, YB (Wang, Yan-Bin);  You, ZH (You, Zhu-Hong);  Li, LP (Li, Li-Ping);  Huang, DS (Huang, De-Shuang);  Zhou, FF (Zhou, Feng-Feng);  Yang, S (Yang, Shan)
Adobe PDF(945Kb)  |  Favorite  |  View/Download:41/0  |  Submit date:2018/07/16
Deep Learning  Zernike Moments  Probabilistic Classification Vector Machines  
PCLPred: A Bioinformatics Method for Predicting Protein-Protein Interactions by Combining Relevance Vector Machine Model with Low-Rank Matrix Approximation 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2018, 卷号: 19, 期号: 4, 页码: 1-13
Authors:  Li, LP (Li, Li-Ping)[ 1 ];  Wang, YB (Wang, Yan-Bin)[ 2 ];  You, ZH (You, Zhu-Hong)[ 1 ];  Li, Y (Li, Yang)[ 1 ];  An, JY (An, Ji-Yong)[ 3 ]
Adobe PDF(2668Kb)  |  Favorite  |  View/Download:73/0  |  Submit date:2018/10/30
Protein-protein Interactions (Ppi)  Low Rank  Protein Sequence  Relevance Vector Machine (Rvm)  Evolutionary Information  
Using Two-dimensional Principal Component Analysis and Rotation Forest for Prediction of Protein-Protein Interactions 期刊论文
SCIENTIFIC REPORTS, 2018, 卷号: 8, 期号: 12874, 页码: 1-9
Authors:  Wang, L (Wang, Lei)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 2 ];  Yan, X (Yan, Xin)[ 4 ];  Xia, SX (Xia, Shi-Xiong)[ 3 ];  Liu, F (Liu, Feng)[ 5 ];  Li, LP (Li, Li-Ping)[ 2 ];  Zhang, W (Zhang, Wei)[ 1 ];  Zhou, Y (Zhou, Yong)[ 3 ]
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An Ensemble Classifier with Random Projection for Predicting Protein-Protein Interactions Using Sequence and Evolutionary Information 期刊论文
APPLIED SCIENCES-BASEL, 2018, 卷号: 8, 期号: 1, 页码: 1-15
Authors:  Song, XY (Song, Xiao-Yu);  Chen, ZH (Chen, Zhan-Heng);  Sun, XY (Sun, Xiang-Yang);  You, ZH (You, Zhu-Hong);  Li, LP (Li, Li-Ping);  Zhao, Y (Zhao, Yang)
Adobe PDF(3673Kb)  |  Favorite  |  View/Download:38/0  |  Submit date:2018/03/05
Protein-protein Interactions  Position-specific Scoring Matrix  Random Projection Ensemble Classifier  Support Vector Machine