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In Silico Prediction of Small Molecule-miRNA Associations Based on the HeteSim Algorithm 期刊论文
MOLECULAR THERAPY-NUCLEIC ACIDS, 2019, 卷号: 14, 期号: 3, 页码: 274-286
Authors:  Qu, J (Qu, Jia)[ 1 ];  Chen, X (Chen, Xing)[ 1 ];  Sun, YZ (Sun, Ya-Zhou)[ 2 ];  Zhao, Y (Zhao, Yan)[ 1 ];  Cai, SB (Cai, Shu-Bin)[ 2 ];  Ming, Z (Ming, Zhong)[ 2 ];  You, ZH (You, Zhu-Hong)[ 3 ];  Li, JQ (Li, Jian-Qiang)[ 2 ]
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A High Efficient Biological Language Model for Predicting Protein-Protein Interactions 期刊论文
CELLS, 2019, 卷号: 8, 期号: 2, 页码: 1-12
Authors:  Wang, YB (Wang, Yanbin)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 1 ];  Yang, S (Yang, Shan)[ 1,2 ];  Li, X (Li, Xiao)[ 1 ];  Jiang, TH (Jiang, Tong-Hai)[ 1 ];  Zhou, X (Zhou, Xi)[ 1 ]
Adobe PDF(1624Kb)  |  Favorite  |  View/Download:33/1  |  Submit date:2019/05/16
protein-protein interactions  bio-language processing  sentencepiece  convolution neural network  unigram language model  
Improved Prediction of Protein-Protein Interactions Using Descriptors Derived From PSSM via Gray Level Co-Occurrence Matrix 期刊论文
IEEE ACCESS, 2019, 卷号: 7, 期号: 4, 页码: 49456-49465
Authors:  Zhu, HJ (Zhu, Hui-Juan)[ 1 ];  You, ZH (You, Zhu-Hong)[ 2,3 ];  Shi, WL (Shi, Wei-Lei)[ 2 ];  Xu, SK (Xu, Shou-Kun)[ 4 ];  Jiang, TH (Jiang, Tong-Hai)[ 2,3 ];  Zhuang, LH (Zhuang, Li-Hua)[ 4 ]
Adobe PDF(8880Kb)  |  Favorite  |  View/Download:48/0  |  Submit date:2019/05/16
Protein-protein interactions  rotation forest  position-specific scoring matrix  gray level co-occurrence matrix  
LMTRDA: Using logistic model tree to predict MiRNA-disease associations by fusing multi-source information of sequences and similarities 期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2019, 卷号: 15, 期号: 3, 页码: 1-18
Authors:  Wang, L (Wang, Lei)[ 1 ];  You, ZH (You, Zhu-Hong)[ 1 ];  Chen, X (Chen, Xing)[ 2 ];  Li, YM (Li, Yang-Ming)[ 3 ];  Dong, YN (Dong, Ya-Nan)[ 4 ];  Li, LP (Li, Li-Ping)[ 1 ];  Zheng, K (Zheng, Kai)[ 1 ]
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Age Is Important for the Early-Stage Detection of Breast Cancer on Both Transcriptomic and Methylomic Biomarkers 期刊论文
FRONTIERS IN GENETICS, 2019, 卷号: 10, 期号: 3, 页码: 1-13
Authors:  Feng, X (Feng, Xin)[ 1,2 ];  Li, JL (Li, Jialiang)[ 2,3 ];  Li, H (Li, Han)[ 2,3 ];  Chen, H (Chen, Hang)[ 1,2 ];  Li, F (Li, Fei)[ 2,3 ];  Liu, QW (Liu, Quewang)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 4 ];  Zhou, FF (Zhou, Fengfeng)[ 1,2,3 ]
Adobe PDF(3526Kb)  |  Favorite  |  View/Download:31/0  |  Submit date:2019/04/18
age  feature selection  TriVote  BRCA  classification  transcriptome  methylome  
Prediction of Self-Interacting Proteins from Protein Sequence Information Based on Random Projection Model and Fast Fourier Transform 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 卷号: 20, 期号: 4, 页码: 1-15
Authors:  Chen, ZH (Chen, Zhan-Heng)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 1,2 ];  Li, LP (Li, Li-Ping)[ 1 ];  Wang, YB (Wang, Yan-Bin)[ 1 ];  Wong, L (Wong, Leon)[ 1,2 ];  Yi, HC (Yi, Hai-Cheng)[ 1,2 ]
Adobe PDF(969Kb)  |  Favorite  |  View/Download:21/0  |  Submit date:2019/05/16
self-interacting proteins  position-specific scoring matrix  fast Fourier transform  random projection  
Sequence-based Prediction of Protein-Protein Interactions Using Gray Wolf Optimizer-Based Relevance Vector Machine 期刊论文
EVOLUTIONARY BIOINFORMATICS, 2019, 卷号: 15, 期号: 5, 页码: 1-10
Authors:  An, JY (An, Ji-Yong)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 3 ];  Zhou, Y (Zhou, Yong)[ 1,2 ];  Wang, DF (Wang, Da-Fu)[ 1,2 ]
Adobe PDF(462Kb)  |  Favorite  |  View/Download:33/0  |  Submit date:2019/06/28
RVM  gray wolf optimizer  BIG  PSSM  
Protein-Protein Interactions Prediction via Multimodal Deep Polynomial Network and Regularized Extreme Learning Machine 期刊论文
IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS, 2019, 卷号: 23, 期号: 3, 页码: 1290-1303
Authors:  Lei, HJ (Lei, Haijun)[ 1 ];  Wen, YT (Wen, Yuting)[ 1 ];  You, ZH (You, Zhuhong)[ 2 ];  Elazab, A (Elazab, Ahmed)[ 3 ];  Tan, EL (Tan, Ee-Leng)[ 4 ];  Zhao, YJ (Zhao, Yujia)[ 1 ];  Lei, BY (Lei, Baiying)[ 3 ]
Adobe PDF(4814Kb)  |  Favorite  |  View/Download:33/0  |  Submit date:2019/06/28
Protein-protein interactions  prediction  multimodal deep polynomial network  regularization extreme learning machine  
一种蛋白质自相互作用的预测方法 专利
专利类型: 发明专利, 公开号: CN107609352A, 公开日期: 2018-01-19,
Inventors:  陈沾衡;  尤著宏;  李晓;  蒋同海;  王延斌;  方昱斌;  陈沾兴
Favorite  |  View/Download:6/0  |  Submit date:2019/08/06
BNPMDA: Bipartite Network Projection for MiRNA-Disease Association prediction 期刊论文
BIOINFORMATICS, 2018, 卷号: 34, 期号: 18, 页码: 3178-3186
Authors:  Chen, X (Chen, Xing)[ 1 ];  Xie, D (Xie, Di)[ 2 ];  Wang, L (Wang, Lei)[ 1 ];  Zhao, Q (Zhao, Qi)[ 2,3 ];  You, ZH (You, Zhu-Hong)[ 4 ];  Liu, HS (Liu, Hongsheng)[ 3,5 ]
Adobe PDF(375Kb)  |  Favorite  |  View/Download:65/0  |  Submit date:2018/10/19