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An improved efficient rotation forest algorithm to predict the interactions among proteins 期刊论文
SOFT COMPUTING, 2018, 卷号: 22, 期号: 10, 页码: 3373-3381
Authors:  Wang, L (Wang, Lei);  You, ZH (You, Zhu-Hong);  Xia, SX (Xia, Shi-Xiong);  Chen, X (Chen, Xing);  Yan, X (Yan, Xin);  Zhou, Y (Zhou, Yong);  Liu, F (Liu, Feng)
Adobe PDF(764Kb)  |  Favorite  |  View/Download:21/0  |  Submit date:2018/06/20
Rotation Forest  Ensemble Learning  Bioinformatics  Support Vector Machine  
An Ensemble Classifier with Random Projection for Predicting Protein-Protein Interactions Using Sequence and Evolutionary Information 期刊论文
APPLIED SCIENCES-BASEL, 2018, 卷号: 8, 期号: 1, 页码: 1-15
Authors:  Song, XY (Song, Xiao-Yu);  Chen, ZH (Chen, Zhan-Heng);  Sun, XY (Sun, Xiang-Yang);  You, ZH (You, Zhu-Hong);  Li, LP (Li, Li-Ping);  Zhao, Y (Zhao, Yang)
Adobe PDF(3673Kb)  |  Favorite  |  View/Download:41/0  |  Submit date:2018/03/05
Protein-protein Interactions  Position-specific Scoring Matrix  Random Projection Ensemble Classifier  Support Vector Machine  
An ensemble approach for large-scale identification of protein-protein interactions using the alignments of multiple sequences 期刊论文
ONCOTARGET, 2017, 卷号: 8, 期号: 3, 页码: 5149-5159
Authors:  Wang, L (Wang, Lei);  You, ZH (You, Zhu-Hong);  Chen, X (Chen, Xing);  Li, JQ (Li, Jian-Qiang);  Yan, X (Yan, Xin);  Zhang, W (Zhang, Wei);  Huang, YA (Huang, Yu-An)
Adobe PDF(2107Kb)  |  Favorite  |  View/Download:65/0  |  Submit date:2017/03/17
Disease  Position-specific Scoring Matrix  Multiple Sequences Alignments  Cancer  
Prediction of protein-protein interactions by label propagation with protein evolutionary and chemical information derived from heterogeneous network 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2017, 卷号: 430, 期号: 10, 页码: 9-20
Authors:  Wen, YT (Wen, Yu-Ting);  Lei, HJ (Lei, Hai-Jun);  You, ZH (You, Zhu-Hong);  Lei, BY (Lei, Bai-Ying);  Chen, X (Chen, Xing);  Li, LP (Li, Li-Ping)
Adobe PDF(1847Kb)  |  Favorite  |  View/Download:31/0  |  Submit date:2017/11/30
Protein-protein Interactions  Prediction  Similarity Network Fusion  Label Propagation Algorithm  
Highly Efficient Framework for Predicting Interactions Between Proteins 期刊论文
IEEE TRANSACTIONS ON CYBERNETICS, 2017, 卷号: 47, 期号: 3, 页码: 731-743
Authors:  You, ZH (You, Zhu-Hong);  Zhou, MC (Zhou, MengChu);  Luo, X (Luo, Xin);  Li, S (Li, Shuai)
Adobe PDF(3031Kb)  |  Favorite  |  View/Download:69/0  |  Submit date:2017/03/23
Big Data  Feature Extraction  Kernel Extreme Learning Machine (K-elm)  Low-rank Approximation (Lra)  Protein-protein Interactions (Ppis)  Support Vector Machine (Svm)  
Advancing the prediction accuracy of protein-protein interactions by utilizing evolutionary information from position-specific scoring matrix and ensemble classifier 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2017, 卷号: 418, 期号: 4, 页码: 105-110
Authors:  Wang, L (Wang, Lei);  You, ZH (You, Zhu-Hong);  Xia, SX (Xia, Shi-Xiong);  Liu, F (Liu, Feng);  Chen, X (Chen, Xing);  Yan, X (Yan, Xin);  Zhou, Y (Zhou, Yong)
Adobe PDF(446Kb)  |  Favorite  |  View/Download:52/0  |  Submit date:2017/05/17
Position-specific Scoring Matrix  Multiple Sequences Alignments  Rotation Forest  Cancer